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Wednesday, June 11, 2014

My First Research Project

Before my freshmen year of college, Clarkson University took on the expensive venture of letting me research under a faculty mentor. That's right - before I took any introductory science courses or labs. While I of course didn't make any big discoveries, it was a deeply maturing, humbling, and inspiring experience. 

I'm going to now kill two birds with one stone. 1) Proper abstract format and 2) attempt to elucidate you on the details of my research. If you don't care about these two things (and I wouldn't blame you), just skip ahead

Here is the abstract of my research:


The Estrogen-Receptor Responsiveness in Various Cervical Epithelial Cell Lines

Name, Faculty Mentor(s)
Department of Biology, Clarkson University, Potsdam, NY
                                                 
The major risk factor associated with cervical cancer is infection with high-risk strains of human papillomaviruses (HPV). HPV16 and 18 alone cause 70% of cancers attributable to HPV. However, HPV resolves spontaneously in 80 – 90% of cases; the low frequency of persisting infections suggests that HPV alone does not lead to cervical cancer. Scientists believe that non-viral cofactors, such as estrogen, must also contribute to the onset of cancer. The uterine cervix is highly responsive to estrogen and recent studies suggest that estrogen and its receptor, ERĪ±, in combination with HPV oncogenes, contribute to carcinogenesis by inducing cell proliferation. We are measuring and comparing the estrogen responsiveness of cultured HPV16-immortalized, tumor, and normal cervical epithelial cell lines. Cells are transfected with a reporter gene containing the estrogen response element (ERE) attached to the firefly luciferase gene. The cells are treated with varying dosages of estradiol and the estrogen activity is determined using the dual luciferase assay. Overall, our findings support high estrogen sensitivity in normal cells and low responsiveness in tumor lines. We will use this data to determine the optimal dosage and duration of exposure to fulvestrant, an estrogen receptor inhibitor, as a treatment of HPV-infected cells.


I’d like to acknowledge and thank the National Institutes of Health (NIH) for their support and funding, and for the resources and knowledge provided by our mentor, Dr. Craig Woodworth.

*DISCLAIMER* - It took me about 10 research articles to be able to understand what I was writing - so don't worry!


What I Learned from my First Research Project


1) Death Trap of Idealism

When students first enter STEM fields and consider the concept of "researching" they often enter a false notion of optimism. For the biochemistry student, she will find a cure for cancer; the evolutionary biology student will discover a new species; the engineer will build a cost-effective clean water delivering system for  third world countries. These are fine life goals to have, but as an undergraduate researcher your main goal is to master techniques. Little else (unless you are a junior or senior) is expected of you.

2.) Reading 

Thanks to my thoughtful mentors, any idealistic dreams that might have budded inside of me were smothered under the humbling load of dense academic papers that I was told to read. Reading these can be utterly DRAINING and understanding one article might take close to 100 Google searches to clarify terms and concepts. My advice - save the reading for home! If you read in between experiments you will likely be too tired to concentrate on your experiment.  Also, if you aren't already a coffee or tea drinker, become one.

3.) Don't Run into Dead Ends

So you made a hypothesis and you want so desperately for your data to support it. You construe the data or represent it in a way to best serve your interests. Don't fall into this
trap! If you have done enough trials, and it is clear that your data doesn't support your hypothesis, it's okay! An unsupported hypothesis often opens up new horizons of scientific possibilities and explanations. Research is all about critical thinking. Use the articles you have read to help clarify the meaning of your results and create a new hypothesis. When you reach a dead end, build new roads. 


For More Tips on Research, visit:  US News 8 Tips for the College Researcher

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